TCRex v0.3.3: December 06, 2022
  • Addition of the AIRR file format
  • Allow parsing of IMGT alleles in the standard IMGT format (e.g. TRBV12-3*00) or alternative format where '*' is replaced by ':' (e.g. TRBV12-3:00)
  • Update parsing and filtering of TCR entries: this might have an impact on the results
  • Allow usage of custom background data set when using pre-trained models
  • Add Benjamini-Hochberg correction on the p-values of the enrichment results
TCRex v0.3.2: October 12, 2020
  • The upper limit of the enrichment threshold was changed from 5% to 1%
  • The upper limit of the BPR threshold was changed from 100% to 1%
  • The download of all prediction results is no longer available. Only filtered results can still be downloaded.
  • Update home page: checkboxes for epitopes that are not present in an older selected model version are now hidden
  • Stability, performance, and usability improvements
TCRex v0.3.1: September 8, 2020
  • Update results page and output file
  • Stability, performance, and usability improvements
TCRex v0.3.0: July 4, 2019
  • Addition of epitope-specificity enrichment analysis
  • Renaming of FPR to BPR
  • Default BPR threshold is 0.01%. (Previously, a default FPR threshold of 0.1% was used.)
TCRex v0.2.1: May 11, 2019
  • Addition of IMGT parsing capabilities
  • Retraining of classifiers with additional training data
TCRex v0.2.0: October 17, 2018
  • Stability, performance, and usability improvements
  • Functionality to train custom epitope prediction models
  • Update output file
  • Retraining of classifiers
TCRex v0.1.0: July 19, 2018
First (beta) version of the TCRex web tool